Cow genome map


           Conread name:
           Ss1.1-rgul0101_i8.5
        

               Conread position:
               1-410
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-512
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               1-528
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 505
               

               Conread position:
               1-594
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               16-493
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 56
               

               Conread position:
               17-573
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               349
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               180, 187
               

               Conread position:
               17-636
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               377
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               176, 183
               

               Conread position:
               19-262
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               87, 77
               

               Conread position:
               19-594
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               509, 485
               

               Conread position:
               20-512
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               20-566
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               337
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               101, 90
               

               Conread position:
               24-486
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 88
               

               Conread position:
               24-635
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 243
               

               Conread position:
               25-339
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               156, 161
               

               Conread position:
               26-573
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 178
               

               Conread position:
               33-463
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               34-409
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               76, 86
               

               Conread position:
               35-432
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 77
               

               Conread position:
               35-485
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               86, 77
               

               Conread position:
               35-486
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               276
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 85
               

               Conread position:
               35-486
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               70, 85
               

               Conread position:
               35-487
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               284
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               240, 249
               

               Conread position:
               35-494
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 313
               

               Conread position:
               35-507
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               86, 77
               

               Conread position:
               35-594
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               131-507
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               66, 71
               

               Conread position:
               203-408
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 61
               

               Conread position:
               215-483
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               150, 154
               
Show alignments to all cow chromosomes.