Cow genome map

Conread name: Ss1.1-rhlv28b_c5.5

Conread position: 42-228
Cow position: chr19:22475914-22475728 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 42-228
Cow position: chr19:22523027-22522841 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 45-228
Cow position: chr19:2418178-2417995 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 45-228
Cow position: chr19:2444177-2443994 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 45-235
Cow position: chr19:22706962-22706772 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 227-392
Cow position: chr19:2417719-2417554 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 227-393
Cow position: chr19:2443914-2443748 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 227-393
Cow position: chr19:22475643-22475477 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 227-393
Cow position: chr19:22522756-22522590 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 227-393
Cow position: chr19:22706204-22706038 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 518-791
Cow position: chr19:22522100-22521827 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 518-829
Cow position: chr19:2416942-2416631 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 518-829
Cow position: chr19:2443358-2443047 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 518-829
Cow position: chr19:22474114-22473803 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 518-829
Cow position: chr19:22705178-22704867 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 827-1032
Cow position: chr19:2416547-2416342 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 827-1032
Cow position: chr19:2442963-2442758 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 827-1032
Cow position: chr19:22521153-22520948 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 827-1032
Cow position: chr19:22704753-22704548 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 827-1046
Cow position: chr19:22473168-22472950 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1017-1157
Cow position: chr19:22704489-22704349 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 93

Conread position: 1030-1159
Cow position: chr19:22471801-22471672 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 1159-1331
Cow position: chr19:22703524-22703352 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1159-1332
Cow position: chr19:2415797-2415624 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1159-1332
Cow position: chr19:2442008-2441835 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1159-1332
Cow position: chr19:22471587-22471414 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1159-1335
Cow position: chr19:22519481-22519305 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1433-1529
Cow position: chr19:22702997-22702901 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1530-1664
Cow position: chr19:22469163-22469029 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1530-1681
Cow position: chr19:2440162-2440011 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1530-1682
Cow position: chr19:2413076-2412924 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1530-1682
Cow position: chr19:22517854-22517702 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.