Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 411-576 |
| Cow position: | chr10:21341001-21341173 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 412-576 |
| Cow position: | chr10:53822522-53822361 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 415-575 |
| Cow position: | chr10:69632923-69632766 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 415-781 |
| Cow position: | chr10:21010918-21010535 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 35 |
| Conread position: | 422-581 |
| Cow position: | chr10:14606503-14606348 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 602-781 |
| Cow position: | chr10:21341238-21341416 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 602-781 |
| Cow position: | chr10:50565660-50565838 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 605-771 |
| Cow position: | chr10:60963279-60963113 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 605-777 |
| Cow position: | chr10:50564494-50564662 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-781 |
| Cow position: | chr10:9108969-9109140 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 605-781 |
| Cow position: | chr10:16899952-16900124 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 114 |
| Conread position: | 605-781 |
| Cow position: | chr10:41118429-41118602 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 140, 40 |
| Conread position: | 605-781 |
| Cow position: | chr10:53822076-53821904 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 605-781 |
| Cow position: | chr10:67156608-67156436 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 605-804 |
| Cow position: | chr10:45267535-45267329 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 81, 32 |
| Conread position: | 606-781 |
| Cow position: | chr10:9372523-9372697 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 606-804 |
| Cow position: | chr10:55143169-55143370 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 35 |
| Conread position: | 614-781 |
| Cow position: | chr10:69632693-69632531 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 616-772 |
| Cow position: | chr10:14894464-14894617 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 643-781 |
| Cow position: | chr10:48450504-48450372 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.