Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 402-573 |
| Cow position: | chr11:48073979-48074148 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 416-575 |
| Cow position: | chr11:31348876-31349037 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 422-751 |
| Cow position: | chr11:31815254-31815597 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 577-781 |
| Cow position: | chr11:58354865-58355069 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 586-781 |
| Cow position: | chr11:19228318-19228514 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 604-760 |
| Cow position: | chr11:50040652-50040808 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 605-781 |
| Cow position: | chr11:12320649-12320472 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 152 |
| Conread position: | 605-781 |
| Cow position: | chr11:14191407-14191235 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 605-781 |
| Cow position: | chr11:52785754-52785585 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 605-784 |
| Cow position: | chr11:2891885-2891710 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 142, 40 |
| Conread position: | 606-780 |
| Cow position: | chr11:85701822-85702000 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 41 |
| Conread position: | 610-781 |
| Cow position: | chr11:35745733-35745902 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 610-781 |
| Cow position: | chr11:39867565-39867744 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 153 |
| Conread position: | 610-781 |
| Cow position: | chr11:63667163-63667331 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 126, 35 |
| Conread position: | 610-782 |
| Cow position: | chr11:40582385-40582213 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 618-780 |
| Cow position: | chr11:65753036-65752875 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 648-781 |
| Cow position: | chr11:70695024-70695155 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.