Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 415-575 |
| Cow position: | chr13:52852368-52852201 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 53, 89 |
| Conread position: | 415-576 |
| Cow position: | chr13:15347814-15347975 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 61 |
| Conread position: | 577-781 |
| Cow position: | chr13:27505633-27505424 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 595-781 |
| Cow position: | chr13:42101738-42101554 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 602-781 |
| Cow position: | chr13:33006538-33006714 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 603-780 |
| Cow position: | chr13:43784123-43784298 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 604-781 |
| Cow position: | chr13:26005246-26005421 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 125, 46 |
| Conread position: | 605-743 |
| Cow position: | chr13:5610567-5610704 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 605-781 |
| Cow position: | chr13:14024917-14025089 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-781 |
| Cow position: | chr13:54409334-54409513 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 605-783 |
| Cow position: | chr13:52852132-52851957 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-794 |
| Cow position: | chr13:52184234-52184427 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 34, 174 |
| Conread position: | 610-781 |
| Cow position: | chr13:6063371-6063531 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 622-780 |
| Cow position: | chr13:6492881-6493036 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.