Cow genome map


           Conread name:
           Ss1.1-risp16_f4.5
        

               Conread position:
               590-753
               

               Cow position:
               chr22:3467580-3467741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               598-772
               

               Cow position:
               chr22:13513262-13513091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               602-729
               

               Cow position:
               chr22:7211077-7210953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               604-723
               

               Cow position:
               chr22:20077963-20077848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               604-781
               

               Cow position:
               chr22:6238785-6238614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               605-780
               

               Cow position:
               chr22:29823060-29822885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               605-781
               

               Cow position:
               chr22:35460074-35459901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               610-781
               

               Cow position:
               chr22:894199-894031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.