Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 416-576 |
| Cow position: | chr29:27058508-27058350 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 419-586 |
| Cow position: | chr29:39532599-39532433 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 48 |
| Conread position: | 600-781 |
| Cow position: | chr29:22690017-22689837 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 145, 45 |
| Conread position: | 605-753 |
| Cow position: | chr29:43153106-43152961 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 605-777 |
| Cow position: | chr29:10625916-10625747 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 102, 37 |
| Conread position: | 605-781 |
| Cow position: | chr29:1447137-1447311 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 605-781 |
| Cow position: | chr29:1586364-1586194 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-781 |
| Cow position: | chr29:15521365-15521186 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 605-781 |
| Cow position: | chr29:18444948-18445117 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 605-781 |
| Cow position: | chr29:38262984-38262807 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 140, 40 |
| Conread position: | 606-776 |
| Cow position: | chr29:39532372-39532203 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 607-753 |
| Cow position: | chr29:30721987-30721838 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 607-781 |
| Cow position: | chr29:7621768-7621941 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 102, 38 |
| Conread position: | 609-781 |
| Cow position: | chr29:31177400-31177568 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 610-781 |
| Cow position: | chr29:39296084-39295915 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 615-780 |
| Cow position: | chr29:13500700-13500863 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 110, 32 |
| Conread position: | 623-776 |
| Cow position: | chr29:27475613-27475764 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.