Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 403-576 |
| Cow position: | chr3:83459217-83459043 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 78, 13 |
| Conread position: | 563-780 |
| Cow position: | chr3:20351864-20351651 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 576-744 |
| Cow position: | chr3:17615779-17615608 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 577-781 |
| Cow position: | chr3:48244041-48244251 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 602-781 |
| Cow position: | chr3:72884841-72884663 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 36 |
| Conread position: | 604-781 |
| Cow position: | chr3:6559236-6559416 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 604-781 |
| Cow position: | chr3:63998212-63998028 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 605-755 |
| Cow position: | chr3:81080707-81080853 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-779 |
| Cow position: | chr3:4446240-4446410 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 605-781 |
| Cow position: | chr3:8146898-8147069 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 131, 37 |
| Conread position: | 605-781 |
| Cow position: | chr3:8708666-8708838 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-781 |
| Cow position: | chr3:11952163-11952340 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 605-781 |
| Cow position: | chr3:16574598-16574425 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-781 |
| Cow position: | chr3:23178571-23178397 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-781 |
| Cow position: | chr3:31110343-31110168 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 605-781 |
| Cow position: | chr3:53211198-53211024 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-781 |
| Cow position: | chr3:83980920-83981092 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 605-784 |
| Cow position: | chr3:23187337-23187149 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 160 |
| Conread position: | 610-781 |
| Cow position: | chr3:45948823-45948655 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 615-781 |
| Cow position: | chr3:63151801-63151967 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 651-777 |
| Cow position: | chr3:28595695-28595819 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 92, 12 |
| Conread position: | 653-781 |
| Cow position: | chr3:53910652-53910526 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.