Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 406-576 |
| Cow position: | chr4:36506036-36505868 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 419-576 |
| Cow position: | chr4:4126097-4125938 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 60, 80 |
| Conread position: | 577-781 |
| Cow position: | chr4:37548623-37548406 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 151 |
| Conread position: | 581-781 |
| Cow position: | chr4:66853820-66854021 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 604-781 |
| Cow position: | chr4:165626-165451 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 143, 41 |
| Conread position: | 604-781 |
| Cow position: | chr4:35070421-35070596 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 605-727 |
| Cow position: | chr4:4020608-4020484 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 605-729 |
| Cow position: | chr4:14947450-14947570 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 605-776 |
| Cow position: | chr4:4032214-4032370 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 605-779 |
| Cow position: | chr4:37857334-37857159 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 605-781 |
| Cow position: | chr4:3901821-3901994 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 605-781 |
| Cow position: | chr4:26617590-26617764 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-781 |
| Cow position: | chr4:33002614-33002789 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 38 |
| Conread position: | 605-781 |
| Cow position: | chr4:43283868-43284041 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 129, 42 |
| Conread position: | 605-784 |
| Cow position: | chr4:37509765-37509591 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 605-785 |
| Cow position: | chr4:18797561-18797381 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 605-786 |
| Cow position: | chr4:55648037-55647866 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 606-731 |
| Cow position: | chr4:37343428-37343552 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 39 |
| Conread position: | 606-781 |
| Cow position: | chr4:30016840-30016672 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 606-781 |
| Cow position: | chr4:54379182-54379354 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 610-774 |
| Cow position: | chr4:23613093-23613253 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 611-781 |
| Cow position: | chr4:54377547-54377380 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 654-781 |
| Cow position: | chr4:59577458-59577332 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.