Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 415-575 |
| Cow position: | chr5:45196334-45196491 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 415-781 |
| Cow position: | chr5:42710007-42709621 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 602-781 |
| Cow position: | chr5:3396607-3396430 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 161, 25 |
| Conread position: | 604-739 |
| Cow position: | chr5:49610009-49610142 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 604-781 |
| Cow position: | chr5:47838010-47837834 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 605-779 |
| Cow position: | chr5:6390762-6390591 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 150, 9 |
| Conread position: | 605-781 |
| Cow position: | chr5:2188695-2188866 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 605-781 |
| Cow position: | chr5:39338685-39338861 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 605-781 |
| Cow position: | chr5:41330544-41330365 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 605-781 |
| Cow position: | chr5:51247625-51247794 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 607-781 |
| Cow position: | chr5:75866846-75867017 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 38 |
| Conread position: | 610-743 |
| Cow position: | chr5:43401197-43401067 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 625-776 |
| Cow position: | chr5:39084001-39083853 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 654-782 |
| Cow position: | chr5:43087157-43087029 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 9 |
Show alignments to all cow chromosomes.