Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 412-575 |
| Cow position: | chr7:42325020-42325181 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 415-575 |
| Cow position: | chr7:43987207-43987374 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 422-572 |
| Cow position: | chr7:27092631-27092478 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 423-576 |
| Cow position: | chr7:24034961-24035110 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 96, 45 |
| Conread position: | 574-781 |
| Cow position: | chr7:59514928-59514717 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 58 |
| Conread position: | 605-754 |
| Cow position: | chr7:43987441-43987580 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 605-777 |
| Cow position: | chr7:31947174-31947347 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 605-777 |
| Cow position: | chr7:50740973-50740803 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-780 |
| Cow position: | chr7:42325251-42325422 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 605-781 |
| Cow position: | chr7:21038825-21038646 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 37 |
| Conread position: | 605-781 |
| Cow position: | chr7:23653219-23653393 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 605-781 |
| Cow position: | chr7:24035179-24035354 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 606-781 |
| Cow position: | chr7:40960837-40961015 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 156, 39 |
| Conread position: | 610-781 |
| Cow position: | chr7:11881729-11881561 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 135, 35 |
| Conread position: | 610-782 |
| Cow position: | chr7:69123221-69123391 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 614-781 |
| Cow position: | chr7:26776347-26776516 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 617-772 |
| Cow position: | chr7:27107434-27107586 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 654-781 |
| Cow position: | chr7:9434406-9434279 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.