Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 602-781 |
| Cow position: | chr9:11315718-11315896 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 604-781 |
| Cow position: | chr9:6163873-6164055 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 87, 41 |
| Conread position: | 604-781 |
| Cow position: | chr9:34315146-34315330 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 41 |
| Conread position: | 605-781 |
| Cow position: | chr9:9561888-9561714 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 605-781 |
| Cow position: | chr9:10772889-10773063 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 102, 38 |
| Conread position: | 605-781 |
| Cow position: | chr9:10896690-10896509 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 605-781 |
| Cow position: | chr9:20984081-20984256 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 605-781 |
| Cow position: | chr9:25032601-25032429 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-781 |
| Cow position: | chr9:31644087-31643902 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 160 |
| Conread position: | 605-781 |
| Cow position: | chr9:55033167-55033344 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 606-780 |
| Cow position: | chr9:6656052-6655882 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 606-780 |
| Cow position: | chr9:44718194-44718023 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 610-781 |
| Cow position: | chr9:13453556-13453390 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 610-781 |
| Cow position: | chr9:62568639-62568473 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 610-784 |
| Cow position: | chr9:10894489-10894659 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 611-781 |
| Cow position: | chr9:6317111-6316936 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 619-781 |
| Cow position: | chr9:6721529-6721370 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 38, 23 |
Show alignments to all cow chromosomes.