Cow genome map
| Conread name: | Ss1.1-risp16_f4.5 |
| Conread position: | 415-575 |
| Cow position: | chrX:1340749-1340582 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 418-576 |
| Cow position: | chrX:17483164-17483014 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 577-772 |
| Cow position: | chrX:802833-803033 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 581-744 |
| Cow position: | chrX:31443849-31444014 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 602-779 |
| Cow position: | chrX:38739912-38740083 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 604-780 |
| Cow position: | chrX:24630965-24631136 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 140, 35 |
| Conread position: | 605-777 |
| Cow position: | chrX:23364310-23364139 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 605-781 |
| Cow position: | chrX:1340509-1340340 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 605-781 |
| Cow position: | chrX:31908954-31908781 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 605-781 |
| Cow position: | chrX:31919153-31918982 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 605-781 |
| Cow position: | chrX:42549725-42549898 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 605-782 |
| Cow position: | chrX:29774620-29774793 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 606-780 |
| Cow position: | chrX:14214465-14214293 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 125, 36 |
| Conread position: | 609-781 |
| Cow position: | chrX:38737029-38736858 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 36 |
| Conread position: | 610-781 |
| Cow position: | chrX:25219123-25219292 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 610-781 |
| Cow position: | chrX:42915690-42915855 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 623-729 |
| Cow position: | chrX:4547131-4547026 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.