Cow genome map


           Conread name:
           Ss1.1-rjca15c_n11.5
        

               Conread position:
               316-654
               

               Cow position:
               chr1:58604338-58604689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               37, 201
               

               Conread position:
               372-670
               

               Cow position:
               chr1:71024039-71024356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               388-670
               

               Cow position:
               chr1:49184385-49184086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 82
               

               Conread position:
               388-670
               

               Cow position:
               chr1:57385946-57385648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               399-659
               

               Cow position:
               chr1:79685614-79685875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               400-591
               

               Cow position:
               chr1:78068385-78068581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               460-670
               

               Cow position:
               chr1:43454751-43454970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               53, 157
               
Show alignments to all cow chromosomes.