Cow genome map


           Conread name:
           Ss1.1-rjca15c_n11.5
        

               Conread position:
               311-670
               

               Cow position:
               chr18:24240999-24240608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               23, 195
               

               Conread position:
               379-671
               

               Cow position:
               chr18:50594944-50594628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               388-568
               

               Cow position:
               chr18:6713608-6713799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               390-651
               

               Cow position:
               chr18:30381074-30381359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 92
               

               Conread position:
               395-588
               

               Cow position:
               chr18:23048839-23049032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 110
               

               Conread position:
               418-670
               

               Cow position:
               chr18:13894477-13894208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 215
               

               Conread position:
               420-670
               

               Cow position:
               chr18:22404108-22403842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               27, 0
               
Show alignments to all cow chromosomes.