Cow genome map


           Conread name:
           Ss1.1-rjca15c_n11.5
        

               Conread position:
               388-591
               

               Cow position:
               chr3:2421731-2421521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 112
               

               Conread position:
               390-581
               

               Cow position:
               chr3:1935808-1936008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               391-662
               

               Cow position:
               chr3:27321218-27321504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 179
               

               Conread position:
               396-670
               

               Cow position:
               chr3:55687880-55688177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 129
               

               Conread position:
               397-670
               

               Cow position:
               chr3:75161755-75162046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               400-668
               

               Cow position:
               chr3:43208221-43208508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               409-556
               

               Cow position:
               chr3:71277336-71277488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               37, 123
               
Show alignments to all cow chromosomes.