Cow genome map


           Conread name:
           Ss1.1-rjca17c_g8.5
        

               Conread position:
               1-197
               

               Cow position:
               chr5:18065148-18065358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr5:27300165-27299950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 93
               

               Conread position:
               6-145
               

               Cow position:
               chr5:22623461-22623320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               248-381
               

               Cow position:
               chr5:18065331-18065462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               126, 11
               

               Conread position:
               259-388
               

               Cow position:
               chr5:27299975-27299845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               259-401
               

               Cow position:
               chr5:22623265-22623123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.