Cow genome map


           Conread name:
           Ss1.1-rjej04b_k1.5
        

               Conread position:
               1-212
               

               Cow position:
               chr1:13556974-13556760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               26, 122
               

               Conread position:
               1-257
               

               Cow position:
               chr1:39297097-39296834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 242
               

               Conread position:
               7-202
               

               Cow position:
               chr1:26529882-26529684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               89, 73
               

               Conread position:
               11-188
               

               Cow position:
               chr1:35039858-35039688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               13-189
               

               Cow position:
               chr1:49746164-49746348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               15-209
               

               Cow position:
               chr1:65105273-65105074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               18-214
               

               Cow position:
               chr1:15815613-15815422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 151
               
Show alignments to all cow chromosomes.