Cow genome map
| Conread name: | Ss1.1-rlin09_o8.5 |
| Conread position: | 1-128 |
| Cow position: | chr1:21561253-21561126 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-139 |
| Cow position: | chr1:31764845-31764984 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 127 |
| Conread position: | 1-144 |
| Cow position: | chr1:38706621-38706759 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-160 |
| Cow position: | chr1:64803864-64804023 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 118, 130 |
| Conread position: | 2-122 |
| Cow position: | chr1:83677090-83677213 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-126 |
| Cow position: | chr1:95514072-95513948 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-158 |
| Cow position: | chr1:89146640-89146794 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 3-108 |
| Cow position: | chr1:12390251-12390356 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 3-159 |
| Cow position: | chr1:1496296-1496452 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 111 |
| Conread position: | 3-178 |
| Cow position: | chr1:25076000-25076176 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 113, 138 |
| Conread position: | 4-132 |
| Cow position: | chr1:42175959-42175832 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 110 |
| Conread position: | 5-104 |
| Cow position: | chr1:42537073-42537171 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 5-158 |
| Cow position: | chr1:72422177-72422328 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 6-160 |
| Cow position: | chr1:95153102-95152950 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 113, 121 |
| Conread position: | 8-160 |
| Cow position: | chr1:22824135-22823984 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 98, 127 |
| Conread position: | 9-104 |
| Cow position: | chr1:196781-196876 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-100 |
| Cow position: | chr1:66306392-66306303 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 77 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-159 |
| Cow position: | chr1:60403991-60403846 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 18-160 |
| Cow position: | chr1:54258787-54258645 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 19-160 |
| Cow position: | chr1:77685763-77685902 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 29-111 |
| Cow position: | chr1:54267733-54267817 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 76 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 32-160 |
| Cow position: | chr1:84815336-84815209 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 87, 9 |
Show alignments to all cow chromosomes.