Cow genome map
| Conread name: | Ss1.1-rlin09_o8.5 |
| Conread position: | 1-158 |
| Cow position: | chr5:57398997-57399152 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 2-101 |
| Cow position: | chr5:19626829-19626730 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-160 |
| Cow position: | chr5:60514774-60514930 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 138 |
| Conread position: | 6-106 |
| Cow position: | chr5:29831268-29831368 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-182 |
| Cow position: | chr5:25447136-25446964 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 8-159 |
| Cow position: | chr5:17828230-17828379 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 10-110 |
| Cow position: | chr5:9859132-9859232 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-160 |
| Cow position: | chr5:55783716-55783864 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 11-132 |
| Cow position: | chr5:39815256-39815377 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 12-111 |
| Cow position: | chr5:8149066-8149165 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-154 |
| Cow position: | chr5:74690014-74690149 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 17-173 |
| Cow position: | chr5:44582522-44582683 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 25-181 |
| Cow position: | chr5:12902149-12901997 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 29-160 |
| Cow position: | chr5:54712842-54712971 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.