Cow genome map


           Conread name:
           Ss1.1-rlin09_o8.5
        

               Conread position:
               1-103
               

               Cow position:
               chr8:43153435-43153537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-106
               

               Cow position:
               chr8:11733972-11733865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-111
               

               Cow position:
               chr8:43220-43110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr8:28322209-28322054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               116, 132
               

               Conread position:
               5-155
               

               Cow position:
               chr8:5173050-5173196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               7-111
               

               Cow position:
               chr8:36771211-36771107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-160
               

               Cow position:
               chr8:27731272-27731121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               8-160
               

               Cow position:
               chr8:5665457-5665610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               111, 135
               

               Conread position:
               11-160
               

               Cow position:
               chr8:32332243-32332390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               13-110
               

               Cow position:
               chr8:30728536-30728635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               13-154
               

               Cow position:
               chr8:5385456-5385595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               34-155
               

               Cow position:
               chr8:3423211-3423093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.