Cow genome map


           Conread name:
           Ss1.1-rlin25_b13.5
        

               Conread position:
               39-357
               

               Cow position:
               chr22:8874967-8875310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               69-312
               

               Cow position:
               chr22:35943200-35942942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               38, 211
               

               Conread position:
               69-672
               

               Cow position:
               chr22:36581171-36580557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               631
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 207
               

               Conread position:
               273-507
               

               Cow position:
               chr22:36552880-36552652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               72, 33
               

               Conread position:
               327-665
               

               Cow position:
               chr22:36591531-36591207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 147
               

               Conread position:
               338-672
               

               Cow position:
               chr22:298017-297691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               297, 49
               

               Conread position:
               389-671
               

               Cow position:
               chr22:8875568-8875853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               390-672
               

               Cow position:
               chr22:292504-292228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 53
               

               Conread position:
               527-671
               

               Cow position:
               chr22:36552348-36552206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 40
               
Show alignments to all cow chromosomes.