Cow genome map
| Conread name: | Ss1.1-rlin25_b13.5 | 
| Conread position: | 1-650 | 
| Cow position: | chr3:21305328-21304640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 709 | 
| Alignm identity: | 490 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 220 | 
| Conread position: | 1-672 | 
| Cow position: | chr3:64821478-64822145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 699 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 78 | 
| Conread position: | 68-639 | 
| Cow position: | chr3:18729207-18728628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 8e-35 | 
| Alignm gaps (pig, cow): | 41, 26 | 
| Conread position: | 72-303 | 
| Cow position: | chr3:5829691-5829442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 35, 198 | 
| Conread position: | 123-506 | 
| Cow position: | chr3:49601943-49601554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 20, 31 | 
| Conread position: | 338-560 | 
| Cow position: | chr3:37624529-37624737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 33, 47 | 
| Conread position: | 338-672 | 
| Cow position: | chr3:70886984-70887304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 260, 45 | 
| Conread position: | 387-672 | 
| Cow position: | chr3:31415420-31415705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 56 | 
Show alignments to all cow chromosomes.
