Cow genome map
| Conread name: | Ss1.1-rmas924b_k4.5 |
| Conread position: | 12-592 |
| Cow position: | chr1:20039147-20039727 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 659-990 |
| Cow position: | chr1:86110851-86110517 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 669-946 |
| Cow position: | chr1:71079069-71078777 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 669-968 |
| Cow position: | chr1:56225355-56225673 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 280 |
| Conread position: | 669-969 |
| Cow position: | chr1:8129078-8128770 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 669-970 |
| Cow position: | chr1:61884808-61885121 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 669-971 |
| Cow position: | chr1:56618762-56618444 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 669-971 |
| Cow position: | chr1:91023579-91023258 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 279 |
| Conread position: | 669-972 |
| Cow position: | chr1:68817910-68817589 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 276 |
| Conread position: | 669-985 |
| Cow position: | chr1:41696947-41697277 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 669-991 |
| Cow position: | chr1:41138243-41137916 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 672-977 |
| Cow position: | chr1:25383554-25383885 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 281 |
| Conread position: | 677-971 |
| Cow position: | chr1:20104165-20104476 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 267 |
| Conread position: | 677-993 |
| Cow position: | chr1:72304474-72304173 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 678-943 |
| Cow position: | chr1:53397889-53398155 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 678-990 |
| Cow position: | chr1:75744758-75745089 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 81 |
| Conread position: | 679-988 |
| Cow position: | chr1:81290406-81290729 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 150 |
| Conread position: | 695-972 |
| Cow position: | chr1:43505444-43505735 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 713-972 |
| Cow position: | chr1:46143526-46143256 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 172 |
| Conread position: | 719-970 |
| Cow position: | chr1:5597267-5597003 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 221 |
Show alignments to all cow chromosomes.