Cow genome map


           Conread name:
           Ss1.1-rmas924b_k4.5
        

               Conread position:
               662-988
               

               Cow position:
               chr12:15089351-15089694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 190
               

               Conread position:
               669-995
               

               Cow position:
               chr12:18123530-18123857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               109, 43
               

               Conread position:
               677-981
               

               Cow position:
               chr12:20777071-20776754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 78
               

               Conread position:
               678-934
               

               Cow position:
               chr12:11056733-11057000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               680-985
               

               Cow position:
               chr12:25561227-25561544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               686-970
               

               Cow position:
               chr12:7902923-7902640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               713-968
               

               Cow position:
               chr12:18583101-18582836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 230
               

               Conread position:
               742-1032
               

               Cow position:
               chr12:12232813-12233111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 73
               
Show alignments to all cow chromosomes.