Cow genome map


           Conread name:
           Ss1.1-rmas924b_k4.5
        

               Conread position:
               659-989
               

               Cow position:
               chr15:16261529-16261197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               39, 6
               

               Conread position:
               669-868
               

               Cow position:
               chr15:16307619-16307415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               669-979
               

               Cow position:
               chr15:26079157-26079471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 151
               

               Conread position:
               669-984
               

               Cow position:
               chr15:22532444-22532125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 85
               

               Conread position:
               700-954
               

               Cow position:
               chr15:24967960-24967703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               780-992
               

               Cow position:
               chr15:46283835-46284056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               13, 152
               

               Conread position:
               796-965
               

               Cow position:
               chr15:36422677-36422509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 131
               
Show alignments to all cow chromosomes.