Cow genome map


           Conread name:
           Ss1.1-rmas924b_k4.5
        

               Conread position:
               669-966
               

               Cow position:
               chr17:33933825-33933508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 236
               

               Conread position:
               669-971
               

               Cow position:
               chr17:908668-908985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 77
               

               Conread position:
               678-982
               

               Cow position:
               chr17:12536536-12536215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 205
               

               Conread position:
               695-952
               

               Cow position:
               chr17:20022562-20022288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               695-973
               

               Cow position:
               chr17:34791112-34790818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               699-994
               

               Cow position:
               chr17:21039521-21039823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               719-984
               

               Cow position:
               chr17:12959082-12959358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               31, 159
               
Show alignments to all cow chromosomes.