Cow genome map


           Conread name:
           Ss1.1-rmas924b_k4.5
        

               Conread position:
               669-946
               

               Cow position:
               chr21:42135674-42135376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 279
               

               Conread position:
               669-971
               

               Cow position:
               chr21:44214070-44214380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 158
               

               Conread position:
               669-979
               

               Cow position:
               chr21:24858261-24858593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 98
               

               Conread position:
               679-1005
               

               Cow position:
               chr21:34654032-34654380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               680-989
               

               Cow position:
               chr21:742245-742561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 129
               

               Conread position:
               695-972
               

               Cow position:
               chr21:641563-641853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               700-965
               

               Cow position:
               chr21:28030269-28030541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 217
               

               Conread position:
               708-971
               

               Cow position:
               chr21:802318-802055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               708-1004
               

               Cow position:
               chr21:14126276-14126576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 163
               

               Conread position:
               788-972
               

               Cow position:
               chr21:8506466-8506279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 143
               
Show alignments to all cow chromosomes.