Cow genome map


           Conread name:
           Ss1.1-rmas924b_k4.5
        

               Conread position:
               669-1007
               

               Cow position:
               chr29:34773853-34773512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 184
               

               Conread position:
               669-1013
               

               Cow position:
               chr29:22162372-22162019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 220
               

               Conread position:
               672-973
               

               Cow position:
               chr29:36530751-36531071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               680-1002
               

               Cow position:
               chr29:19949198-19949539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               713-966
               

               Cow position:
               chr29:36952371-36952114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 141
               

               Conread position:
               713-1009
               

               Cow position:
               chr29:20770272-20770582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 230
               

               Conread position:
               718-970
               

               Cow position:
               chr29:41112941-41112688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               74, 41
               
Show alignments to all cow chromosomes.