Cow genome map


           Conread name:
           Ss1.1-rmas924b_k4.5
        

               Conread position:
               661-946
               

               Cow position:
               chr4:19097158-19097462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               669-954
               

               Cow position:
               chr4:52832143-52831836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               669-987
               

               Cow position:
               chr4:38944384-38944048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               6, 86
               

               Conread position:
               669-989
               

               Cow position:
               chr4:36290503-36290837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 96
               

               Conread position:
               669-998
               

               Cow position:
               chr4:54455468-54455126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 306
               

               Conread position:
               670-921
               

               Cow position:
               chr4:68889681-68889424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 28
               

               Conread position:
               676-990
               

               Cow position:
               chr4:61897648-61897339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               94, 5
               

               Conread position:
               699-972
               

               Cow position:
               chr4:23880751-23880475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               71, 162
               

               Conread position:
               719-968
               

               Cow position:
               chr4:37991526-37991782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 100
               
Show alignments to all cow chromosomes.