Cow genome map


           Conread name:
           Ss1.1-rnca13b_a16.5
        

               Conread position:
               1-505
               

               Cow position:
               chr19:35565849-35565365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 149
               

               Conread position:
               617-749
               

               Cow position:
               chr19:21160951-21161082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               617-767
               

               Cow position:
               chr19:21859803-21859647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               636-757
               

               Cow position:
               chr19:33211003-33210880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               636-760
               

               Cow position:
               chr19:21424416-21424289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               637-788
               

               Cow position:
               chr19:43376395-43376548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               53, 107
               

               Conread position:
               639-767
               

               Cow position:
               chr19:16802281-16802410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 21
               
Show alignments to all cow chromosomes.