Cow genome map


           Conread name:
           Ss1.1-rnca13b_a16.5
        

               Conread position:
               561-769
               

               Cow position:
               chr20:25977728-25977932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               129, 24
               

               Conread position:
               594-721
               

               Cow position:
               chr20:4323344-4323477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               609-783
               

               Cow position:
               chr20:12309103-12309284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 140
               

               Conread position:
               618-752
               

               Cow position:
               chr20:10781192-10781054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               618-776
               

               Cow position:
               chr20:3303863-3303703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 112
               

               Conread position:
               636-776
               

               Cow position:
               chr20:5917169-5917030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               637-759
               

               Cow position:
               chr20:13710295-13710174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               652-755
               

               Cow position:
               chr20:31596476-31596371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.