Cow genome map
| Conread name: | Ss1.1-rnca13b_a16.5 |
| Conread position: | 1-451 |
| Cow position: | chr5:33172481-33172905 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 587-792 |
| Cow position: | chr5:43493233-43493441 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 607-764 |
| Cow position: | chr5:38903070-38902906 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 616-778 |
| Cow position: | chr5:9301184-9301348 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 618-765 |
| Cow position: | chr5:32250415-32250562 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 618-775 |
| Cow position: | chr5:41016833-41016998 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 636-757 |
| Cow position: | chr5:19215067-19214942 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 636-776 |
| Cow position: | chr5:63180790-63180642 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 637-776 |
| Cow position: | chr5:3983094-3982957 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 642-783 |
| Cow position: | chr5:39744823-39744965 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 48, 129 |
Show alignments to all cow chromosomes.