Cow genome map


           Conread name:
           Ss1.1-rpbfe0123_b23.5
        

               Conread position:
               1-268
               

               Cow position:
               chr11:74554999-74554732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-310
               

               Cow position:
               chr11:74554915-74554606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               272, 277
               

               Conread position:
               1-312
               

               Cow position:
               chr11:74555083-74554772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-317
               

               Cow position:
               chr11:74554663-74554347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-176
               

               Cow position:
               chr11:74554325-74554154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               3-271
               

               Cow position:
               chr11:74554745-74554477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-315
               

               Cow position:
               chr11:74554577-74554265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               3-320
               

               Cow position:
               chr11:74554493-74554176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.