Cow genome map

Conread name: Ss1.1-rpbfe0123_b23.5

Conread position: 1-257
Cow position: chr14:25794402-25794147 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 69, 242

Conread position: 1-308
Cow position: chr14:25795410-25795103 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 113, 101

Conread position: 1-310
Cow position: chr14:25836071-25836380 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 258, 267

Conread position: 1-310
Cow position: chr14:25877435-25877744 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 111

Conread position: 1-312
Cow position: chr14:25783536-25783847 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position: chr14:25783620-25783931 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position: chr14:25794486-25794174 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 1-312
Cow position: chr14:25794738-25794427 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 1-312
Cow position: chr14:25794822-25794511 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 114, 105

Conread position: 1-312
Cow position: chr14:25836743-25837054 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 209, 200

Conread position: 1-312
Cow position: chr14:25859544-25859855 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 257, 267

Conread position: 1-315
Cow position: chr14:25783368-25783682 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 102

Conread position: 1-315
Cow position: chr14:25795326-25795012 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 29, 17

Conread position: 1-316
Cow position: chr14:25783452-25783767 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 1-316
Cow position: chr14:25783704-25784019 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-316
Cow position: chr14:25783956-25784271 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-316
Cow position: chr14:25784040-25784355 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-316
Cow position: chr14:25784124-25784439 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 1-316
Cow position: chr14:25784376-25784691 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-316
Cow position: chr14:25794990-25794675 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-316
Cow position: chr14:25795074-25794759 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-317
Cow position: chr14:25784460-25784770 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 271, 0

Conread position: 1-317
Cow position: chr14:25795158-25794842 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position: chr14:25783788-25784107 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position: chr14:25794654-25794335 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 187, 198

Conread position: 1-320
Cow position: chr14:25876511-25876830 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 204, 209

Conread position: 1-322
Cow position: chr14:25784208-25784529 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-310
Cow position: chr14:25836660-25836968 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 257, 266

Conread position: 2-312
Cow position: chr14:25836492-25836802 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 272, 276

Conread position: 2-316
Cow position: chr14:25784293-25784607 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-316
Cow position: chr14:25795241-25794927 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-320
Cow position: chr14:25860049-25860367 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 199
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-232
Cow position: chr14:25836997-25837226 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-258
Cow position: chr14:25911025-25911278 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 243, 0

Conread position: 3-263
Cow position: chr14:25859714-25859974 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-263
Cow position: chr14:25877605-25877865 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-271
Cow position: chr14:3155435-3155703 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-271
Cow position: chr14:3156092-3156360 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 3-272
Cow position: chr14:25860386-25860655 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 109

Conread position: 3-286
Cow position: chr14:25860134-25860417 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 177
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-286
Cow position: chr14:25877185-25877468 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 207, 200

Conread position: 3-295
Cow position: chr14:447615-447907 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 33

Conread position: 3-296
Cow position: chr14:25859378-25859671 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 193, 181

Conread position: 3-309
Cow position: chr14:3155924-3156230 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-310
Cow position: chr14:3080400-3080093 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 28

Conread position: 3-310
Cow position: chr14:3080652-3080345 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 40, 27

Conread position: 3-310
Cow position: chr14:3127828-3127521 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 28

Conread position: 3-310
Cow position: chr14:25836241-25836548 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 199
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 208, 202

Conread position: 3-310
Cow position: chr14:25836409-25836716 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 19

Conread position: 3-310
Cow position: chr14:25860218-25860525 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 196
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 256, 281

Conread position: 3-310
Cow position: chr14:25876345-25876652 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 191
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 131

Conread position: 3-310
Cow position: chr14:25876429-25876736 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 191
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 208, 202

Conread position: 3-310
Cow position: chr14:25877269-25877576 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 195
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 256, 281

Conread position: 3-310
Cow position: chr14:25910941-25911248 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 256, 265

Conread position: 3-311
Cow position: chr14:3156176-3156484 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position: chr14:680417-680726 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position: chr14:680837-681146 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 194
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 27

Conread position: 3-312
Cow position: chr14:3080232-3079923 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 33

Conread position: 3-312
Cow position: chr14:3080316-3080007 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position: chr14:3080820-3080511 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 190
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 208, 200

Conread position: 3-312
Cow position: chr14:3100811-3100502 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 33

Conread position: 3-312
Cow position: chr14:3155519-3155828 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position: chr14:25794568-25794258 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 230, 0

Conread position: 3-312
Cow position: chr14:25836577-25836886 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 256, 265

Conread position: 3-312
Cow position: chr14:25836913-25837222 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 18

Conread position: 3-312
Cow position: chr14:25859294-25859603 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 20

Conread position: 3-312
Cow position: chr14:25860302-25860611 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 196
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 186, 208

Conread position: 3-312
Cow position: chr14:25876597-25876906 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 201, 205

Conread position: 3-312
Cow position: chr14:25877353-25877662 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 197
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 186, 208

Conread position: 3-313
Cow position: chr14:25794904-25794594 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-316
Cow position: chr14:680921-681234 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 197
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 206, 200

Conread position: 3-316
Cow position: chr14:25835989-25836302 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-316
Cow position: chr14:25836157-25836470 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-317
Cow position: chr14:25877101-25877415 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 200
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-320
Cow position: chr14:25836325-25836642 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 3-320
Cow position: chr14:25876765-25877082 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 201
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 282, 288

Conread position: 3-321
Cow position: chr14:25783874-25784192 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-321
Cow position: chr14:25877521-25877839 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 204
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 25

Conread position: 3-324
Cow position: chr14:25860470-25860792 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 25

Conread position: 9-288
Cow position: chr14:3156014-3156293 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 9-312
Cow position: chr14:25835912-25836214 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 279, 5

Conread position: 15-286
Cow position: chr14:25859810-25860081 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 191, 173

Conread position: 33-315
Cow position: chr14:25795462-25795180 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 172, 156

Conread position: 39-310
Cow position: chr14:3101441-3101171 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 67, 79

Conread position: 41-310
Cow position: chr14:3155389-3155658 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 41-310
Cow position: chr14:3155878-3156147 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 41-316
Cow position: chr14:25783324-25783599 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 146

Conread position: 42-263
Cow position: chr14:3127873-3127651 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 218, 0

Conread position: 47-258
Cow position: chr14:3156547-3156755 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 180, 0

Conread position: 48-299
Cow position: chr14:420630-420881 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 100

Conread position: 117-316
Cow position: chr14:25783316-25783515 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 65

Conread position: 147-312
Cow position: chr14:3155411-3155576 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.