Cow genome map


           Conread name:
           Ss1.1-rpbfe0123_b23.5
        

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               69, 242
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               113, 101
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               258, 267
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               126, 111
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               114, 105
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               209, 200
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               257, 267
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 102
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               271, 0
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               187, 198
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               204, 209
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-310
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               257, 266
               

               Conread position:
               2-312
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               272, 276
               

               Conread position:
               2-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-320
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-258
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               243, 0
               

               Conread position:
               3-263
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-263
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-271
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-271
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-272
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               124, 109
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               207, 200
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               3-296
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               193, 181
               

               Conread position:
               3-309
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               208, 202
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               256, 281
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               143, 131
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               208, 202
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               256, 281
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               256, 265
               

               Conread position:
               3-311
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               208, 200
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               230, 0
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               256, 265
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 18
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               186, 208
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               201, 205
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               186, 208
               

               Conread position:
               3-313
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               206, 200
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-317
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-320
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-320
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               282, 288
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               9-288
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-312
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               279, 5
               

               Conread position:
               15-286
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               191, 173
               

               Conread position:
               33-315
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               172, 156
               

               Conread position:
               39-310
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               67, 79
               

               Conread position:
               41-310
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               41-310
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               41-316
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 146
               

               Conread position:
               42-263
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               218, 0
               

               Conread position:
               47-258
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               48-299
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 100
               

               Conread position:
               117-316
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 65
               

               Conread position:
               147-312
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.