Cow genome map
Conread name: | Ss1.1-rpbfe0123_b23.5 |
Conread position: | 1-163 |
Cow position: | chr17:22551652-22551490 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-185 |
Cow position: | chr17:22473778-22473963 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 127 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 1-234 |
Cow position: | chr17:22589406-22589173 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 149 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-251 |
Cow position: | chr17:22498783-22498533 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 163 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-269 |
Cow position: | chr17:22552660-22552392 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 182 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 19, 27 |
Conread position: | 1-289 |
Cow position: | chr17:22553080-22552792 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 188 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 185, 195 |
Conread position: | 1-307 |
Cow position: | chr17:22499371-22499065 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-308 |
Cow position: | chr17:22452105-22451798 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 206 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-308 |
Cow position: | chr17:22589910-22589603 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 197 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-310 |
Cow position: | chr17:22551820-22551511 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 207 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 42, 35 |
Conread position: | 1-310 |
Cow position: | chr17:22552072-22551763 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 213 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 258, 279 |
Conread position: | 1-310 |
Cow position: | chr17:22552240-22551931 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 269, 279 |
Conread position: | 1-310 |
Cow position: | chr17:22552744-22552435 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 35 |
Conread position: | 1-310 |
Cow position: | chr17:22552996-22552687 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 210 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 185, 195 |
Conread position: | 1-310 |
Cow position: | chr17:22589826-22589517 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 199 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 301, 296 |
Conread position: | 1-310 |
Cow position: | chr17:22590162-22589853 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 191 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 21, 27 |
Conread position: | 1-310 |
Cow position: | chr17:22590246-22589937 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 195 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-312 |
Cow position: | chr17:22452189-22451878 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 215 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 205, 209 |
Conread position: | 1-312 |
Cow position: | chr17:22452357-22452046 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 200 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-312 |
Cow position: | chr17:22499287-22498976 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 30 |
Conread position: | 1-320 |
Cow position: | chr17:22499035-22498716 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 218 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 112, 102 |
Conread position: | 1-320 |
Cow position: | chr17:22552492-22552173 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 211 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-320 |
Cow position: | chr17:22590078-22589759 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 212 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-321 |
Cow position: | chr17:22589994-22589675 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 219 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 19, 27 |
Conread position: | 1-330 |
Cow position: | chr17:22499119-22498791 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 221 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 110, 104 |
Conread position: | 1-336 |
Cow position: | chr17:22473358-22473692 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 216 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 316, 0 |
Conread position: | 3-241 |
Cow position: | chr17:22551734-22551496 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 164 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 183, 193 |
Conread position: | 3-258 |
Cow position: | chr17:22473696-22473952 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 172 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 228, 0 |
Conread position: | 3-261 |
Cow position: | chr17:22452019-22451761 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 176 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-265 |
Cow position: | chr17:22589656-22589394 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 173 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 17, 27 |
Conread position: | 3-274 |
Cow position: | chr17:22552910-22552639 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 194 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 34, 40 |
Conread position: | 3-310 |
Cow position: | chr17:22473444-22473751 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 202 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 100, 106 |
Conread position: | 3-310 |
Cow position: | chr17:22551986-22551679 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 203 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-310 |
Cow position: | chr17:22552406-22552099 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 213 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 33, 40 |
Conread position: | 3-312 |
Cow position: | chr17:22452271-22451962 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 213 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 139, 145 |
Conread position: | 3-312 |
Cow position: | chr17:22473276-22473585 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 193 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-312 |
Cow position: | chr17:22473612-22473921 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 209 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 124, 103 |
Conread position: | 3-312 |
Cow position: | chr17:22498949-22498640 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 211 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 185, 195 |
Conread position: | 3-312 |
Cow position: | chr17:22552826-22552517 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 205 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-320 |
Cow position: | chr17:22552154-22551837 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 212 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 183, 193 |
Conread position: | 3-320 |
Cow position: | chr17:22552322-22552005 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 211 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 40, 34 |
Conread position: | 3-320 |
Cow position: | chr17:22552574-22552257 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 213 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 184, 194 |
Conread position: | 3-333 |
Cow position: | chr17:22451935-22451606 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 205 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 124, 103 |
Conread position: | 3-336 |
Cow position: | chr17:22589572-22589240 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 212 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 39, 33 |
Conread position: | 9-310 |
Cow position: | chr17:22551896-22551595 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 205 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 261, 271 |
Conread position: | 27-310 |
Cow position: | chr17:22590304-22590021 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 187 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 232, 253 |
Conread position: | 35-268 |
Cow position: | chr17:22553131-22552897 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 156 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 7, 66 |
Conread position: | 39-312 |
Cow position: | chr17:22473231-22473501 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 181 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 40-310 |
Cow position: | chr17:22499164-22498894 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 192 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 40-311 |
Cow position: | chr17:22498828-22498557 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 185 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 41-308 |
Cow position: | chr17:22452401-22452134 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 186 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 49-312 |
Cow position: | chr17:22499409-22499144 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 180 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 106-317 |
Cow position: | chr17:22590308-22590098 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 139 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 125-312 |
Cow position: | chr17:22452401-22452214 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 130 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.