Cow genome map
| Conread name: | Ss1.1-rpbfe0123_b23.5 |
| Conread position: | 1-262 |
| Cow position: | chr2:78754451-78754711 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 1-262 |
| Cow position: | chr2:78755775-78756036 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 1-270 |
| Cow position: | chr2:78754855-78755124 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 1-289 |
| Cow position: | chr2:82799633-82799921 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 257, 267 |
| Conread position: | 1-308 |
| Cow position: | chr2:78755609-78755914 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 1-310 |
| Cow position: | chr2:78754939-78755248 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-310 |
| Cow position: | chr2:78755275-78755582 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-312 |
| Cow position: | chr2:78755191-78755501 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 1-312 |
| Cow position: | chr2:82799885-82800196 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 1-316 |
| Cow position: | chr2:82799549-82799864 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 110, 95 |
| Conread position: | 1-317 |
| Cow position: | chr2:78755691-78756007 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 109, 105 |
| Conread position: | 1-321 |
| Cow position: | chr2:78755107-78755426 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 1-321 |
| Cow position: | chr2:78755525-78755843 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 2-235 |
| Cow position: | chr2:78756112-78756344 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 2-317 |
| Cow position: | chr2:78755443-78755755 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 189, 76 |
| Conread position: | 3-297 |
| Cow position: | chr2:82799719-82800013 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 210, 215 |
| Conread position: | 3-303 |
| Cow position: | chr2:78754371-78754669 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 3-310 |
| Cow position: | chr2:78755025-78755332 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 3-310 |
| Cow position: | chr2:82799971-82800278 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 3-313 |
| Cow position: | chr2:82800139-82800449 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 35 |
| Conread position: | 3-320 |
| Cow position: | chr2:82799467-82799784 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-233 |
| Cow position: | chr2:82800235-82800453 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 111, 99 |
| Conread position: | 41-310 |
| Cow position: | chr2:78754811-78755080 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 77-317 |
| Cow position: | chr2:82799457-82799697 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.