Cow genome map

Conread name: Ss1.1-rpbfe0123_b23.5

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 108, 116

Conread position: 1-240
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-240
Cow position:
Alignm length: 240
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-262
Cow position:
Alignm length: 265
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 115

Conread position: 1-264
Cow position:
Alignm length: 267
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 111

Conread position: 1-268
Cow position:
Alignm length: 270
Alignm identity: 172
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 124, 112

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-271
Cow position:
Alignm length: 273
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 111

Conread position: 1-275
Cow position:
Alignm length: 277
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 200, 181

Conread position: 1-282
Cow position:
Alignm length: 284
Alignm identity: 182
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 128, 112

Conread position: 1-307
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 28

Conread position: 1-309
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-310
Cow position:
Alignm length: 310
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 206
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 313
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 258, 267

Conread position: 1-312
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 28

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 316
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 112

Conread position: 1-312
Cow position:
Alignm length: 315
Alignm identity: 214
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 232, 282

Conread position: 1-312
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 285

Conread position: 1-312
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 1-312
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 27

Conread position: 1-312
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 142, 147

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-316
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-316
Cow position:
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-316
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-316
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-317
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 1-317
Cow position:
Alignm length: 321
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 28

Conread position: 1-317
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 26

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 1-320
Cow position:
Alignm length: 323
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 176, 198

Conread position: 1-320
Cow position:
Alignm length: 322
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 78, 62

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 211
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-339
Cow position:
Alignm length: 339
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 318, 0

Conread position: 2-320
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 101

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 33

Conread position: 3-262
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-262
Cow position:
Alignm length: 262
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 112

Conread position: 3-268
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 123, 110

Conread position: 3-268
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 33

Conread position: 3-268
Cow position:
Alignm length: 266
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-269
Cow position:
Alignm length: 268
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 24

Conread position: 3-269
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 3-269
Cow position:
Alignm length: 267
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-273
Cow position:
Alignm length: 272
Alignm identity: 170
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 27

Conread position: 3-274
Cow position:
Alignm length: 274
Alignm identity: 175
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 123, 103

Conread position: 3-303
Cow position:
Alignm length: 301
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-303
Cow position:
Alignm length: 301
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-307
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 40, 27

Conread position: 3-308
Cow position:
Alignm length: 308
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 208, 203

Conread position: 3-309
Cow position:
Alignm length: 308
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 208, 203

Conread position: 3-309
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 40, 27

Conread position: 3-310
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-311
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 312
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 25

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 284, 273

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 210
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 311
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 287

Conread position: 3-313
Cow position:
Alignm length: 311
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-316
Cow position:
Alignm length: 314
Alignm identity: 212
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 24

Conread position: 3-316
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-317
Cow position:
Alignm length: 316
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 24

Conread position: 3-319
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-320
Cow position:
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 3-320
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-320
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-320
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-323
Cow position:
Alignm length: 325
Alignm identity: 206
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 27

Conread position: 3-327
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 17, 31

Conread position: 3-327
Cow position:
Alignm length: 329
Alignm identity: 211
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 42

Conread position: 9-310
Cow position:
Alignm length: 303
Alignm identity: 196
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 181, 190

Conread position: 14-312
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 198, 191

Conread position: 22-271
Cow position:
Alignm length: 252
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 181

Conread position: 39-299
Cow position:
Alignm length: 264
Alignm identity: 171
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 70

Conread position: 40-268
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 40-308
Cow position:
Alignm length: 269
Alignm identity: 179
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 40-312
Cow position:
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 40-320
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 18, 25

Conread position: 41-320
Cow position:
Alignm length: 280
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 42-271
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 75

Conread position: 42-309
Cow position:
Alignm length: 268
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 42-320
Cow position:
Alignm length: 279
Alignm identity: 185
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 42-321
Cow position:
Alignm length: 282
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 219, 226

Conread position: 42-330
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 277, 0

Conread position: 43-312
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 48-271
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 58-312
Cow position:
Alignm length: 255
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 66-312
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 0

Show alignments to all cow chromosomes.