Cow genome map

Conread name: Ss1.1-rpbfe0123_b23.5

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 155, 0

Conread position: 1-262
Cow position:
Alignm length: 264
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 185, 62

Conread position: 1-272
Cow position:
Alignm length: 273
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 203, 209

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 188
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 141, 132

Conread position: 1-301
Cow position:
Alignm length: 302
Alignm identity: 187
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 187, 195

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 199
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 58

Conread position: 1-308
Cow position:
Alignm length: 310
Alignm identity: 201
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 21

Conread position: 1-310
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 272, 279

Conread position: 1-310
Cow position:
Alignm length: 312
Alignm identity: 196
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 112, 61

Conread position: 1-310
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-311
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 313
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 29

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 314
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 189, 196

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-313
Cow position:
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 35

Conread position: 1-316
Cow position:
Alignm length: 318
Alignm identity: 198
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 164, 170

Conread position: 1-316
Cow position:
Alignm length: 318
Alignm identity: 197
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 100, 105

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-321
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-321
Cow position:
Alignm length: 321
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 158, 0

Conread position: 1-327
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 41, 30

Conread position: 2-183
Cow position:
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 146

Conread position: 2-262
Cow position:
Alignm length: 263
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 29

Conread position: 2-272
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 79, 196

Conread position: 2-307
Cow position:
Alignm length: 307
Alignm identity: 201
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 175, 194

Conread position: 2-307
Cow position:
Alignm length: 307
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 52, 28

Conread position: 2-308
Cow position:
Alignm length: 311
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 28

Conread position: 2-310
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-223
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-228
Cow position:
Alignm length: 227
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 111

Conread position: 3-250
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 235, 0

Conread position: 3-259
Cow position:
Alignm length: 258
Alignm identity: 165
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 119, 111

Conread position: 3-262
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 30, 10

Conread position: 3-268
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 99, 103

Conread position: 3-285
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 40, 30

Conread position: 3-307
Cow position:
Alignm length: 308
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 25

Conread position: 3-307
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-307
Cow position:
Alignm length: 307
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 103

Conread position: 3-307
Cow position:
Alignm length: 306
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 267, 277

Conread position: 3-308
Cow position:
Alignm length: 308
Alignm identity: 190
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 123, 111

Conread position: 3-308
Cow position:
Alignm length: 307
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 183, 193

Conread position: 3-308
Cow position:
Alignm length: 309
Alignm identity: 200
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 24

Conread position: 3-308
Cow position:
Alignm length: 308
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 171, 193

Conread position: 3-310
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 40, 28

Conread position: 3-310
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-310
Cow position:
Alignm length: 310
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 27

Conread position: 3-310
Cow position:
Alignm length: 309
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 112

Conread position: 3-310
Cow position:
Alignm length: 308
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-310
Cow position:
Alignm length: 309
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 122, 113

Conread position: 3-312
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 27

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 210
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-317
Cow position:
Alignm length: 316
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 290, 280

Conread position: 3-317
Cow position:
Alignm length: 317
Alignm identity: 201
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 25

Conread position: 3-321
Cow position:
Alignm length: 320
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 212, 217

Conread position: 6-229
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 13

Conread position: 20-320
Cow position:
Alignm length: 303
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 202, 186

Conread position: 21-312
Cow position:
Alignm length: 298
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 192

Conread position: 26-258
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 122

Conread position: 38-312
Cow position:
Alignm length: 277
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 76

Conread position: 38-316
Cow position:
Alignm length: 279
Alignm identity: 178
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 40-300
Cow position:
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 107, 0

Conread position: 40-317
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 22

Conread position: 41-312
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 73

Conread position: 42-310
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 71, 65

Conread position: 42-310
Cow position:
Alignm length: 271
Alignm identity: 182
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 60, 64

Conread position: 49-286
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 52-300
Cow position:
Alignm length: 249
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 60-310
Cow position:
Alignm length: 251
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 60-316
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 171, 165

Conread position: 64-310
Cow position:
Alignm length: 249
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 18

Conread position: 77-312
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 83-312
Cow position:
Alignm length: 230
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 110-320
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 121-312
Cow position:
Alignm length: 193
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 25

Conread position: 126-312
Cow position:
Alignm length: 187
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.