Cow genome map


           Conread name:
           Ss1.1-rpbfe0123_b23.5
        

               Conread position:
               1-261
               

               Cow position:
               chr27:21615665-21615405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               257, 104
               

               Conread position:
               1-312
               

               Cow position:
               chr27:21615749-21615439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               1-312
               

               Cow position:
               chr27:21616174-21615858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               147, 75
               

               Conread position:
               1-312
               

               Cow position:
               chr27:21616258-21615942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               231, 153
               

               Conread position:
               3-311
               

               Cow position:
               chr27:21615998-21615691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               171, 51
               

               Conread position:
               3-312
               

               Cow position:
               chr27:21615915-21615606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 103
               

               Conread position:
               38-312
               

               Cow position:
               chr27:21615796-21615523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               229, 0
               
Show alignments to all cow chromosomes.