Cow genome map

Conread name: Ss1.1-rpbfe0123_b23.5

Conread position: 1-240
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-255
Cow position:
Alignm length: 256
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 20

Conread position: 1-265
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 1-267
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-307
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 185, 95

Conread position: 1-310
Cow position:
Alignm length: 310
Alignm identity: 212
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 277

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 317
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 126, 110

Conread position: 1-312
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 286, 273

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 313
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 272, 279

Conread position: 1-312
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 195

Conread position: 1-312
Cow position:
Alignm length: 315
Alignm identity: 196
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 38

Conread position: 1-316
Cow position:
Alignm length: 317
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 92, 104

Conread position: 1-316
Cow position:
Alignm length: 316
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-317
Cow position:
Alignm length: 317
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-317
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-317
Cow position:
Alignm length: 319
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 118

Conread position: 1-317
Cow position:
Alignm length: 318
Alignm identity: 210
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 27, 42

Conread position: 1-320
Cow position:
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position:
Alignm length: 322
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 112, 104

Conread position: 1-330
Cow position:
Alignm length: 332
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 1-331
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 0

Conread position: 2-269
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-312
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 278

Conread position: 2-312
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 275

Conread position: 2-316
Cow position:
Alignm length: 315
Alignm identity: 215
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-316
Cow position:
Alignm length: 315
Alignm identity: 201
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 3-262
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 3-262
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-268
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-271
Cow position:
Alignm length: 269
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-310
Cow position:
Alignm length: 309
Alignm identity: 193
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 102

Conread position: 3-310
Cow position:
Alignm length: 309
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 192

Conread position: 3-310
Cow position:
Alignm length: 308
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-310
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 5, 26

Conread position: 3-312
Cow position:
Alignm length: 310
Alignm identity: 206
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-317
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 11

Conread position: 3-317
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 277

Conread position: 3-320
Cow position:
Alignm length: 318
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-320
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-320
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-320
Cow position:
Alignm length: 320
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 129, 96

Conread position: 3-326
Cow position:
Alignm length: 326
Alignm identity: 216
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 106, 101

Conread position: 3-333
Cow position:
Alignm length: 331
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 9-330
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 18

Conread position: 26-262
Cow position:
Alignm length: 239
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 84

Conread position: 33-275
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 73

Conread position: 33-290
Cow position:
Alignm length: 259
Alignm identity: 168
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 249, 0

Conread position: 33-312
Cow position:
Alignm length: 280
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 34-268
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 68

Conread position: 34-272
Cow position:
Alignm length: 241
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 75

Conread position: 40-312
Cow position:
Alignm length: 277
Alignm identity: 178
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 86, 74

Conread position: 40-320
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 64, 72

Conread position: 41-262
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 41-275
Cow position:
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 66

Conread position: 41-312
Cow position:
Alignm length: 272
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 41-312
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 66

Conread position: 41-331
Cow position:
Alignm length: 301
Alignm identity: 203
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 86, 68

Conread position: 42-272
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 75

Conread position: 42-275
Cow position:
Alignm length: 235
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 165, 140

Conread position: 46-316
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 63-271
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 63-320
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.