Cow genome map
| Conread name: | Ss1.1-rpfco0101_h20.5.5 |
| Conread position: | 4-279 |
| Cow position: | chr13:24162708-24162983 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 122 |
| Conread position: | 4-301 |
| Cow position: | chr13:22125402-22125701 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 258, 0 |
| Conread position: | 12-278 |
| Cow position: | chr13:56333777-56334043 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-291 |
| Cow position: | chr13:56292053-56291771 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 13-239 |
| Cow position: | chr13:56333694-56333920 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-288 |
| Cow position: | chr13:39930710-39930987 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 13-288 |
| Cow position: | chr13:39930794-39931071 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 260, 0 |
| Conread position: | 13-288 |
| Cow position: | chr13:39930878-39931153 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 13-290 |
| Cow position: | chr13:39984130-39984407 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 66 |
| Conread position: | 13-300 |
| Cow position: | chr13:39984298-39984587 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 269, 0 |
| Conread position: | 13-300 |
| Cow position: | chr13:39984550-39984839 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 62 |
| Conread position: | 13-305 |
| Cow position: | chr13:39984466-39984760 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 76, 62 |
| Conread position: | 13-312 |
| Cow position: | chr13:56292136-56291837 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 291, 279 |
| Conread position: | 16-288 |
| Cow position: | chr13:39930629-39930903 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 19-290 |
| Cow position: | chr13:56292877-56292610 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 25-278 |
| Cow position: | chr13:39984646-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-290 |
| Cow position: | chr13:39984236-39984491 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-287 |
| Cow position: | chr13:56292194-56291946 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 56-288 |
| Cow position: | chr13:39930585-39930819 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 217, 0 |
Show alignments to all cow chromosomes.