Cow genome map

Conread name: Ss1.1-rpfco0101_h20.5.5

Conread position: 3-290
Cow position:
Alignm length: 288
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-304
Cow position:
Alignm length: 304
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 289, 0

Conread position: 3-304
Cow position:
Alignm length: 304
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 289, 0

Conread position: 4-230
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 74

Conread position: 4-239
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 4-278
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 4-287
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 4-289
Cow position:
Alignm length: 289
Alignm identity: 188
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 247, 237

Conread position: 4-290
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 4-290
Cow position:
Alignm length: 287
Alignm identity: 192
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 4-292
Cow position:
Alignm length: 290
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 94

Conread position: 4-304
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 90, 94

Conread position: 4-304
Cow position:
Alignm length: 304
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 236, 258

Conread position: 4-304
Cow position:
Alignm length: 303
Alignm identity: 201
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 278, 0

Conread position: 4-304
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 278, 0

Conread position: 4-318
Cow position:
Alignm length: 316
Alignm identity: 203
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 300, 291

Conread position: 9-303
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 159, 143

Conread position: 9-304
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 154, 143

Conread position: 10-285
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 10-290
Cow position:
Alignm length: 281
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-286
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 142, 134

Conread position: 12-289
Cow position:
Alignm length: 280
Alignm identity: 187
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 267, 0

Conread position: 12-290
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-301
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 254, 248

Conread position: 13-212
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 67

Conread position: 13-213
Cow position:
Alignm length: 201
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-278
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 13-285
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 51

Conread position: 13-290
Cow position:
Alignm length: 278
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-290
Cow position:
Alignm length: 278
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 13-290
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 81, 85

Conread position: 13-290
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 13-290
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 13-291
Cow position:
Alignm length: 279
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-291
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 81, 85

Conread position: 13-302
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 269, 0

Conread position: 13-303
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 269, 0

Conread position: 13-304
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 0

Conread position: 13-304
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 279, 0

Conread position: 13-304
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 0

Conread position: 13-304
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 269, 0

Conread position: 13-306
Cow position:
Alignm length: 296
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 269, 0

Conread position: 13-306
Cow position:
Alignm length: 297
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 253, 247

Conread position: 14-300
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 268, 0

Conread position: 21-301
Cow position:
Alignm length: 284
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 146, 125

Conread position: 22-304
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 260, 0

Conread position: 25-290
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 226, 218

Conread position: 44-345
Cow position:
Alignm length: 303
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 245, 252

Conread position: 78-290
Cow position:
Alignm length: 214
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 16

Conread position: 80-290
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 88-290
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.