Cow genome map


           Conread name:
           Ss1.1-rpfco0101_h20.5.5
        

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               281, 0
               

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               2-290
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 152
               

               Conread position:
               2-300
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               284, 0
               

               Conread position:
               2-302
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               283, 0
               

               Conread position:
               3-304
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               244, 251
               

               Conread position:
               4-242
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-243
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               99, 83
               

               Conread position:
               4-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               278, 0
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               88, 82
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               160, 148
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               247, 240
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               94, 89
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               225, 234
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 83
               

               Conread position:
               4-298
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               278, 0
               

               Conread position:
               4-300
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               278, 0
               

               Conread position:
               4-301
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               4-301
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               278, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               94, 89
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               278, 66
               

               Conread position:
               4-307
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               281, 47
               

               Conread position:
               5-300
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               247, 239
               

               Conread position:
               7-290
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               262, 0
               

               Conread position:
               9-300
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               273, 0
               

               Conread position:
               10-337
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               241, 234
               

               Conread position:
               11-287
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-287
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-289
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-290
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 68
               

               Conread position:
               12-290
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-290
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-290
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-290
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-290
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               241, 234
               

               Conread position:
               12-303
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               267, 0
               

               Conread position:
               12-325
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               264, 291
               

               Conread position:
               13-209
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-285
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-288
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               267, 83
               

               Conread position:
               13-289
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               266, 0
               

               Conread position:
               13-290
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-290
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-290
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-290
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-290
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-290
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-291
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-300
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               148, 155
               

               Conread position:
               13-300
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               148, 138
               

               Conread position:
               13-300
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-301
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               13-302
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               13-307
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               276, 0
               

               Conread position:
               14-301
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               268, 5
               

               Conread position:
               16-301
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               266, 135
               

               Conread position:
               17-290
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-290
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-290
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-290
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               154, 128
               

               Conread position:
               25-274
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-304
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               257, 0
               

               Conread position:
               37-287
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               37-302
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               37-302
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               242, 0
               

               Conread position:
               43-300
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               239, 0
               

               Conread position:
               58-278
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               9, 22
               
Show alignments to all cow chromosomes.