Cow genome map


           Conread name:
           Ss1.1-rpfco0101_h20.5.5
        

               Conread position:
               8-290
               

               Cow position:
               chr21:34223077-34222795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               12-242
               

               Cow position:
               chr21:12659231-12659461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 59
               

               Conread position:
               13-243
               

               Cow position:
               chr21:34222820-34222590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-287
               

               Cow position:
               chr21:12608698-12608424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               65, 52
               

               Conread position:
               16-290
               

               Cow position:
               chr21:34222902-34222627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               21-286
               

               Cow position:
               chr21:12608774-12608509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               140, 131
               

               Conread position:
               58-287
               

               Cow position:
               chr21:12608905-12608676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.