Cow genome map
Conread name: | Ss1.1-rpfco0101_h20.5.5 |
Conread position: | 1-289 |
Cow position: | chr22:12458052-12457762 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 204 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 84, 74 |
Conread position: | 2-290 |
Cow position: | chr22:12399203-12398915 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 201 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 74, 84 |
Conread position: | 3-300 |
Cow position: | chr22:12499512-12499811 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 206 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 276, 0 |
Conread position: | 3-302 |
Cow position: | chr22:12475747-12475446 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 206 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 276, 0 |
Conread position: | 3-304 |
Cow position: | chr22:12476083-12475780 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 211 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 271, 0 |
Conread position: | 3-306 |
Cow position: | chr22:12499176-12499481 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 207 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 279, 0 |
Conread position: | 4-287 |
Cow position: | chr22:12418972-12418689 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 189 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12385275-12384989 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 193 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 157, 147 |
Conread position: | 4-290 |
Cow position: | chr22:12399537-12399251 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 192 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12399621-12399335 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 201 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12399705-12399419 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12418804-12418518 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 192 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12431265-12430979 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12431601-12431315 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 184 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 190, 185 |
Conread position: | 4-290 |
Cow position: | chr22:12431769-12431483 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 197 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 26, 32 |
Conread position: | 4-290 |
Cow position: | chr22:12458469-12458182 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 184 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 277, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12458553-12458267 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12475578-12475292 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 192 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12475662-12475376 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 196 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12476166-12475880 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 196 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12499093-12499379 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 196 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 144, 150 |
Conread position: | 4-290 |
Cow position: | chr22:12499597-12499883 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 196 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr22:12499681-12499967 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 188 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-293 |
Cow position: | chr22:12399033-12398744 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 194 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-293 |
Cow position: | chr22:12431013-12430722 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 204 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 278, 0 |
Conread position: | 4-293 |
Cow position: | chr22:12431517-12431226 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 202 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 107, 101 |
Conread position: | 4-300 |
Cow position: | chr22:12476250-12475952 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 202 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 282, 0 |
Conread position: | 4-300 |
Cow position: | chr22:12499009-12499307 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 203 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 282, 0 |
Conread position: | 4-302 |
Cow position: | chr22:12399369-12399069 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 148 |
Conread position: | 4-302 |
Cow position: | chr22:12418888-12418588 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 199 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 279, 0 |
Conread position: | 4-302 |
Cow position: | chr22:12475914-12475614 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 204 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 288, 0 |
Conread position: | 4-302 |
Cow position: | chr22:12476334-12476034 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 205 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 278, 0 |
Conread position: | 4-302 |
Cow position: | chr22:12498925-12499225 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 207 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 275, 0 |
Conread position: | 4-304 |
Cow position: | chr22:12431181-12430879 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 203 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 226, 238 |
Conread position: | 4-307 |
Cow position: | chr22:12499345-12499650 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 206 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 288, 0 |
Conread position: | 4-324 |
Cow position: | chr22:12499429-12499748 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 215 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 278, 299 |
Conread position: | 4-325 |
Cow position: | chr22:12476418-12476099 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 213 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 279, 299 |
Conread position: | 4-355 |
Cow position: | chr22:12458217-12457868 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 225 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 288, 299 |
Conread position: | 5-300 |
Cow position: | chr22:12431432-12431135 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 205 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 154, 143 |
Conread position: | 9-269 |
Cow position: | chr22:12430840-12430579 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 167 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 249, 0 |
Conread position: | 10-209 |
Cow position: | chr22:11641255-11641454 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 146 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 63, 77 |
Conread position: | 10-239 |
Cow position: | chr22:46654326-46654555 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 155 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 78, 68 |
Conread position: | 10-290 |
Cow position: | chr22:11666592-11666872 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 175 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-290 |
Cow position: | chr22:12430923-12430643 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 187 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-290 |
Cow position: | chr22:12431343-12431063 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 197 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-300 |
Cow position: | chr22:46654158-46654450 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 199 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 78, 68 |
Conread position: | 12-240 |
Cow position: | chr22:11640921-11641149 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 156 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 87, 72 |
Conread position: | 12-241 |
Cow position: | chr22:11666678-11666907 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 153 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 154, 163 |
Conread position: | 12-271 |
Cow position: | chr22:11701416-11701675 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 173 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 154, 163 |
Conread position: | 12-289 |
Cow position: | chr22:11641089-11641368 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 184 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 74, 81 |
Conread position: | 12-289 |
Cow position: | chr22:11641173-11641452 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 186 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 266, 261 |
Conread position: | 12-290 |
Cow position: | chr22:11640753-11641031 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 187 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 99, 93 |
Conread position: | 12-290 |
Cow position: | chr22:11640837-11641115 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 184 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-290 |
Cow position: | chr22:11701332-11701610 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 178 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-290 |
Cow position: | chr22:12385437-12385157 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 190 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 30, 70 |
Conread position: | 12-290 |
Cow position: | chr22:12385605-12385325 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 183 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 135, 152 |
Conread position: | 12-290 |
Cow position: | chr22:12399109-12398831 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 192 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-290 |
Cow position: | chr22:12458377-12458099 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 194 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-302 |
Cow position: | chr22:12385183-12384892 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 190 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 282, 0 |
Conread position: | 13-271 |
Cow position: | chr22:12431676-12431418 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 172 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 246, 230 |
Conread position: | 13-290 |
Cow position: | chr22:12399276-12398999 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 187 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 63, 76 |
Conread position: | 13-290 |
Cow position: | chr22:12399780-12399503 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr22:12431088-12430811 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 198 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 138, 151 |
Conread position: | 13-290 |
Cow position: | chr22:12431844-12431567 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 179 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr22:12432264-12431987 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 186 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 138, 149 |
Conread position: | 13-290 |
Cow position: | chr22:12475989-12475712 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 186 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr22:12499270-12499547 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 180 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-300 |
Cow position: | chr22:12432432-12432143 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 187 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 267, 0 |
Conread position: | 13-300 |
Cow position: | chr22:12458292-12458003 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 197 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 267, 0 |
Conread position: | 13-300 |
Cow position: | chr22:12498850-12499139 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 194 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 266, 0 |
Conread position: | 13-301 |
Cow position: | chr22:11641006-11641296 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 189 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 263, 0 |
Conread position: | 13-304 |
Cow position: | chr22:12385688-12385393 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 195 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 218, 239 |
Conread position: | 13-304 |
Cow position: | chr22:12399444-12399151 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 202 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 278, 0 |
Conread position: | 13-304 |
Cow position: | chr22:12458124-12457831 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 205 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 77, 66 |
Conread position: | 13-324 |
Cow position: | chr22:12475821-12475511 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 215 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 291, 279 |
Conread position: | 14-241 |
Cow position: | chr22:12419315-12419088 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 157 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-300 |
Cow position: | chr22:12458627-12458339 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 192 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 268, 0 |
Conread position: | 22-245 |
Cow position: | chr22:14429803-14430026 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 149 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-300 |
Cow position: | chr22:46654002-46654282 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 183 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 231, 222 |
Conread position: | 25-288 |
Cow position: | chr22:12432336-12432073 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 178 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 48, 55 |
Conread position: | 27-324 |
Cow position: | chr22:12399928-12399638 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 191 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 255, 89 |
Conread position: | 28-290 |
Cow position: | chr22:12431915-12431651 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 167 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 30-300 |
Cow position: | chr22:12432499-12432227 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 170 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 246, 0 |
Conread position: | 37-290 |
Cow position: | chr22:12419023-12418770 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 181 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 58-290 |
Cow position: | chr22:12399819-12399587 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 163 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 98-290 |
Cow position: | chr22:12419315-12419123 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 131 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.