Cow genome map
Conread name: | Ss1.1-rpfco0101_h20.5.5 |
Conread position: | 1-290 |
Cow position: | chr23:24547194-24546905 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 198 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-208 |
Cow position: | chr23:24654172-24654376 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 141 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-247 |
Cow position: | chr23:24560331-24560089 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 164 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 226, 188 |
Conread position: | 4-248 |
Cow position: | chr23:25660290-25660534 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 163 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 86, 73 |
Conread position: | 4-273 |
Cow position: | chr23:25698349-25698080 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 175 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 26, 39 |
Conread position: | 4-288 |
Cow position: | chr23:24535738-24535452 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 278, 0 |
Conread position: | 4-289 |
Cow position: | chr23:24560583-24560298 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr23:24522513-24522227 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 184 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 164, 146 |
Conread position: | 4-290 |
Cow position: | chr23:24522597-24522311 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 181 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 26, 32 |
Conread position: | 4-290 |
Cow position: | chr23:24547107-24546821 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 198 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr23:24560415-24560129 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr23:24639355-24639641 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 187 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr23:25626754-25627040 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 200 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 82, 72 |
Conread position: | 4-290 |
Cow position: | chr23:25660206-25660492 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 184 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 185, 180 |
Conread position: | 4-290 |
Cow position: | chr23:25724072-25723786 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-293 |
Cow position: | chr23:24639271-24639562 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 182 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 278, 0 |
Conread position: | 4-300 |
Cow position: | chr23:24560499-24560201 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 0 |
Conread position: | 4-300 |
Cow position: | chr23:25626586-25626884 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 202 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 157, 148 |
Conread position: | 4-304 |
Cow position: | chr23:24626363-24626665 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 211 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 151, 145 |
Conread position: | 8-280 |
Cow position: | chr23:25698681-25698409 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 172 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-292 |
Cow position: | chr23:25626005-25626290 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 183 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 281, 0 |
Conread position: | 11-224 |
Cow position: | chr23:24626538-24626749 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 152 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 143, 135 |
Conread position: | 11-302 |
Cow position: | chr23:24560660-24560367 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 205 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 265, 0 |
Conread position: | 12-274 |
Cow position: | chr23:25660466-25660728 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 171 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-290 |
Cow position: | chr23:24639447-24639725 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 178 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-240 |
Cow position: | chr23:24535813-24535586 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 155 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-243 |
Cow position: | chr23:24522420-24522190 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 158 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-243 |
Cow position: | chr23:24546930-24546700 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 157 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-279 |
Cow position: | chr23:25723979-25723713 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 172 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-280 |
Cow position: | chr23:25698592-25698325 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 173 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-286 |
Cow position: | chr23:25626679-25626952 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 179 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-287 |
Cow position: | chr23:24639616-24639890 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 191 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-289 |
Cow position: | chr23:25626094-25626372 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 184 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 263, 0 |
Conread position: | 13-290 |
Cow position: | chr23:24535897-24535620 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 191 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr23:24547014-24546737 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 182 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr23:24547266-24546989 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 187 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr23:24639700-24639977 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 180 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr23:25626346-25626620 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 179 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 175, 200 |
Conread position: | 13-291 |
Cow position: | chr23:24626456-24626734 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-300 |
Cow position: | chr23:24639532-24639821 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 192 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 269, 0 |
Conread position: | 13-300 |
Cow position: | chr23:24639784-24640073 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 185 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 272, 0 |
Conread position: | 13-324 |
Cow position: | chr23:25626262-25626572 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 199 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 258, 265 |
Conread position: | 16-287 |
Cow position: | chr23:25660385-25660657 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 180 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 18-278 |
Cow position: | chr23:24654102-24654362 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 175 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 233, 226 |
Conread position: | 18-290 |
Cow position: | chr23:24535976-24535704 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 183 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 73, 80 |
Conread position: | 21-233 |
Cow position: | chr23:25626186-25626398 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 151 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 24-280 |
Cow position: | chr23:24521986-24521730 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 169 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 216, 5 |
Conread position: | 28-304 |
Cow position: | chr23:24626303-24626581 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 184 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 251, 0 |
Conread position: | 35-290 |
Cow position: | chr23:24654034-24654290 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 171 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 43-290 |
Cow position: | chr23:24547320-24547073 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 169 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 36, 21 |
Conread position: | 49-290 |
Cow position: | chr23:25724111-25723870 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 158 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 30, 15 |
Conread position: | 56-290 |
Cow position: | chr23:24560699-24560465 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 163 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-300 |
Cow position: | chr23:25660174-25660420 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 168 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 207, 0 |
Conread position: | 112-325 |
Cow position: | chr23:24536050-24535838 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 142 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 171, 0 |
Show alignments to all cow chromosomes.