Cow genome map
Conread name: | Ss1.1-rpfco0101_h20.5.5 |
Conread position: | 1-286 |
Cow position: | chr25:33299034-33299319 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 192 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-290 |
Cow position: | chr25:33157086-33156797 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 190 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-302 |
Cow position: | chr25:33298698-33299001 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 78 |
Conread position: | 1-304 |
Cow position: | chr25:33157170-33156865 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 202 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 275, 0 |
Conread position: | 4-196 |
Cow position: | chr25:33299625-33299817 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 134 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-240 |
Cow position: | chr25:33299121-33299357 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 164 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-247 |
Cow position: | chr25:34447580-34447815 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 164 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 69, 75 |
Conread position: | 4-278 |
Cow position: | chr25:326551-326825 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 174 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-281 |
Cow position: | chr25:23420605-23420882 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 184 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-282 |
Cow position: | chr25:34732050-34731772 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 184 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 60, 83 |
Conread position: | 4-287 |
Cow position: | chr25:346502-346785 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 191 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 132, 138 |
Conread position: | 4-287 |
Cow position: | chr25:33127940-33128223 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 195 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 163, 141 |
Conread position: | 4-288 |
Cow position: | chr25:33144903-33145186 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 184 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 264, 135 |
Conread position: | 4-290 |
Cow position: | chr25:23420353-23420639 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 194 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr25:33157251-33156965 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 196 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr25:33157419-33157133 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 201 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr25:33157503-33157217 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 192 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr25:33298533-33298819 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 202 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 50, 55 |
Conread position: | 4-290 |
Cow position: | chr25:33298785-33299071 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 195 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr25:33298869-33299155 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 196 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr25:33298953-33299239 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 192 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr25:33299289-33299575 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 186 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 69, 76 |
Conread position: | 4-290 |
Cow position: | chr25:33299457-33299743 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 198 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr25:33305744-33305461 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 184 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 257, 24 |
Conread position: | 4-290 |
Cow position: | chr25:34447328-34447614 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 190 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 175, 149 |
Conread position: | 4-290 |
Cow position: | chr25:34732470-34732182 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 186 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 161, 153 |
Conread position: | 4-290 |
Cow position: | chr25:36800853-36801139 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 194 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-290 |
Cow position: | chr25:36800937-36801223 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 192 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-292 |
Cow position: | chr25:326977-327266 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 197 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 49, 59 |
Conread position: | 4-294 |
Cow position: | chr25:36801681-36801971 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 195 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-307 |
Cow position: | chr25:34769650-34769345 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 210 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 278, 0 |
Conread position: | 4-308 |
Cow position: | chr25:33305181-33304879 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 210 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 139, 64 |
Conread position: | 5-289 |
Cow position: | chr25:36800686-36800970 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 186 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-290 |
Cow position: | chr25:36801430-36801715 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 184 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 93, 89 |
Conread position: | 5-329 |
Cow position: | chr25:33305909-33305589 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 221 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 280, 91 |
Conread position: | 6-290 |
Cow position: | chr25:36801515-36801799 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 187 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-300 |
Cow position: | chr25:33305346-33305055 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 201 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 276, 29 |
Conread position: | 7-289 |
Cow position: | chr25:23420524-23420808 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 269, 0 |
Conread position: | 11-290 |
Cow position: | chr25:33127863-33128142 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 193 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-278 |
Cow position: | chr25:366787-367053 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 177 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-290 |
Cow position: | chr25:34769978-34769700 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 188 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-300 |
Cow position: | chr25:34447000-34447290 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 192 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 264, 0 |
Conread position: | 12-300 |
Cow position: | chr25:34769810-34769520 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 199 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 270, 0 |
Conread position: | 12-301 |
Cow position: | chr25:25652250-25652541 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 183 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 63, 68 |
Conread position: | 12-302 |
Cow position: | chr25:36800525-36800817 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 189 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 268, 0 |
Conread position: | 12-304 |
Cow position: | chr25:33305422-33305131 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 208 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 61, 16 |
Conread position: | 12-304 |
Cow position: | chr25:34447084-34447378 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 200 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 270, 0 |
Conread position: | 12-306 |
Cow position: | chr25:34713844-34714140 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 192 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 26 |
Conread position: | 13-229 |
Cow position: | chr25:22235976-22236192 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 142 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-230 |
Cow position: | chr25:34763225-34763442 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 146 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-241 |
Cow position: | chr25:36801030-36801258 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 156 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 145, 152 |
Conread position: | 13-243 |
Cow position: | chr25:34769473-34769243 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 158 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-262 |
Cow position: | chr25:33306318-33306075 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 167 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 13-280 |
Cow position: | chr25:34714265-34714532 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 173 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 161, 168 |
Conread position: | 13-287 |
Cow position: | chr25:33298626-33298900 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 186 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-287 |
Cow position: | chr25:33306068-33305795 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 188 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 85, 123 |
Conread position: | 13-287 |
Cow position: | chr25:34714181-34714455 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 173 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 243, 252 |
Conread position: | 13-289 |
Cow position: | chr25:34447253-34447529 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 192 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 144, 138 |
Conread position: | 13-289 |
Cow position: | chr25:34769557-34769279 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 189 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 267, 0 |
Conread position: | 13-290 |
Cow position: | chr25:33127781-33128058 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr25:33299214-33299491 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 185 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 85, 80 |
Conread position: | 13-290 |
Cow position: | chr25:34769725-34769448 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 191 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr25:34770145-34769868 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 184 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 37, 24 |
Conread position: | 13-290 |
Cow position: | chr25:36801606-36801883 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 181 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 60, 66 |
Conread position: | 13-294 |
Cow position: | chr25:33299550-33299831 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 194 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 60, 67 |
Conread position: | 13-300 |
Cow position: | chr25:23420446-23420735 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 198 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 269, 0 |
Conread position: | 13-300 |
Cow position: | chr25:33299382-33299671 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 200 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 60, 66 |
Conread position: | 13-304 |
Cow position: | chr25:34447421-34447712 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 197 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 83, 73 |
Conread position: | 13-304 |
Cow position: | chr25:34769893-34769600 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 197 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 269, 0 |
Conread position: | 17-290 |
Cow position: | chr25:346431-346704 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 179 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 25, 16 |
Conread position: | 18-243 |
Cow position: | chr25:18642103-18641875 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 154 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 37, 75 |
Conread position: | 21-221 |
Cow position: | chr25:34762900-34763100 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 136 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 21-287 |
Cow position: | chr25:33145169-33145435 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 172 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-288 |
Cow position: | chr25:33298470-33298735 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 185 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 257, 0 |
Conread position: | 26-233 |
Cow position: | chr25:414703-414497 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 141 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 29-242 |
Cow position: | chr25:346610-346824 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 147 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 15, 70 |
Conread position: | 35-287 |
Cow position: | chr25:34446939-34447191 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 168 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 35-300 |
Cow position: | chr25:33306377-33306119 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 177 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 247, 35 |
Conread position: | 36-290 |
Cow position: | chr25:36800633-36800887 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 179 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 41-290 |
Cow position: | chr25:33145024-33145270 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 163 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 206, 11 |
Conread position: | 47-290 |
Cow position: | chr25:414761-414524 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 161 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 48-287 |
Cow position: | chr25:33144863-33145099 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 154 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 174, 0 |
Conread position: | 58-290 |
Cow position: | chr25:22235853-22236085 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 154 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 58-290 |
Cow position: | chr25:33145122-33145354 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 152 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 62-290 |
Cow position: | chr25:23420327-23420555 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 91-290 |
Cow position: | chr25:34770151-34769952 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 135 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 139-290 |
Cow position: | chr25:23420320-23420471 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 108 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.