Cow genome map
| Conread name: | Ss1.1-rpfco0101_h20.5.5 |
| Conread position: | 3-290 |
| Cow position: | chr6:49340793-49341080 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-242 |
| Cow position: | chr6:49341214-49341451 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 4-300 |
| Cow position: | chr6:49396347-49396645 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 9-290 |
| Cow position: | chr6:49340631-49340912 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 245, 238 |
| Conread position: | 9-290 |
| Cow position: | chr6:49341135-49341416 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-290 |
| Cow position: | chr6:49341053-49341332 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 13-287 |
| Cow position: | chr6:49396194-49396462 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 245, 34 |
| Conread position: | 13-290 |
| Cow position: | chr6:49340385-49340660 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 13-290 |
| Cow position: | chr6:49340467-49340744 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-290 |
| Cow position: | chr6:49340551-49340828 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 13-290 |
| Cow position: | chr6:49340719-49340996 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 152, 160 |
| Conread position: | 13-290 |
| Cow position: | chr6:49340887-49341164 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-290 |
| Cow position: | chr6:49340971-49341248 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-290 |
| Cow position: | chr6:49396692-49396969 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 13-300 |
| Cow position: | chr6:49396608-49396897 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 269, 0 |
| Conread position: | 15-290 |
| Cow position: | chr6:49396112-49396381 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 44 |
| Conread position: | 97-283 |
| Cow position: | chr6:49362642-49362828 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.