Cow genome map

Conread name: Ss1.1-rpfco0101_h20.5.5

Conread position: 1-287
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-300
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 281, 0

Conread position: 1-301
Cow position:
Alignm length: 304
Alignm identity: 188
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 58

Conread position: 1-304
Cow position:
Alignm length: 307
Alignm identity: 214
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 251, 241

Conread position: 1-313
Cow position:
Alignm length: 316
Alignm identity: 199
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 163, 150

Conread position: 2-290
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 3-290
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-293
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 286, 0

Conread position: 4-224
Cow position:
Alignm length: 223
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 83

Conread position: 4-288
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 278, 0

Conread position: 4-289
Cow position:
Alignm length: 286
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 4-290
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 4-290
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-290
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 4-290
Cow position:
Alignm length: 289
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 276, 0

Conread position: 4-290
Cow position:
Alignm length: 289
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 191, 184

Conread position: 4-290
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 4-304
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 278, 0

Conread position: 4-312
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 70

Conread position: 6-287
Cow position:
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 6-325
Cow position:
Alignm length: 322
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 276, 297

Conread position: 10-290
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-290
Cow position:
Alignm length: 279
Alignm identity: 182
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-325
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 291

Conread position: 13-276
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 217, 239

Conread position: 13-284
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 13-285
Cow position:
Alignm length: 273
Alignm identity: 178
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-289
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 77, 85

Conread position: 13-289
Cow position:
Alignm length: 277
Alignm identity: 179
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 13-290
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 13-290
Cow position:
Alignm length: 278
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 13-290
Cow position:
Alignm length: 279
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 238, 231

Conread position: 13-290
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 63

Conread position: 13-290
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 160, 148

Conread position: 13-290
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 13-290
Cow position:
Alignm length: 278
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 13-300
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 269, 0

Conread position: 13-300
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 266, 0

Conread position: 13-304
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 0

Conread position: 13-304
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 145

Conread position: 13-304
Cow position:
Alignm length: 294
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 269, 0

Conread position: 13-325
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 0

Conread position: 13-331
Cow position:
Alignm length: 322
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 140

Conread position: 16-290
Cow position:
Alignm length: 280
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 67

Conread position: 25-290
Cow position:
Alignm length: 271
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 66

Conread position: 28-290
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 37-291
Cow position:
Alignm length: 256
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 245, 0

Conread position: 47-290
Cow position:
Alignm length: 245
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 206, 196

Conread position: 58-278
Cow position:
Alignm length: 221
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.